LncBase Predicted v.2
Help
Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
Bulk download:
We have updated the bulk download module, which simplifies the download process! Please find the new online form by following this link
Deprecated!
This version is deprecated. Users are strongly advised to only use the latest, up-to-date versions of DIANA-Tools and Databases.
Please follow this link to navigate to the latest database version.

hsa-miR-106a-5p


or   Search by location
Loading... Please wait, this might take a few seconds...



Go to Experimental module
Filters

Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-106a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
175909-175927
0.015
3
8mer
14011-14034
0.011
0
8mer
10725-10744
0.011
0
8mer
193799-193820
0.010
0
9mer
165221-165240
0.010
3
8mer
89496-89518
0.008
3
8mer
107247-107269
0.008
1
9mer
220519-220544
0.008
1
8mer
225492-225515
0.007
1
8mer
172347-172359
0.007
1
7mer
50478-50500
0.006
0
8mer
199223-199246
0.005
1
7mer
169328-169341
0.005
0
8mer
52131-52154
0.005
1
7mer
17526-17547
0.005
1
6mer
149258-149275
0.005
9
7mer
127554-127570
0.005
1
7mer
56232-56249
0.004
1
7mer
52894-52909
0.004
4
7mer
160691-160714
0.004
3
8mer
155508-155531
0.004
1
8mer
67833-67856
0.004
1
8mer
180846-180863
0.004
1
8mer
221547-221566
0.004
1
8mer
234646-234669
0.004
1
7mer
251110-251132
0.004
0
8mer
213966-213981
0.004
2
7mer
178035-178055
0.004
1
8mer
256647-256666
0.004
0
8mer
250229-250245
0.004
0
6mer
144720-144739
0.004
5
8mer
244863-244886
0.004
0
8mer
77174-77193
0.004
1
7mer
81576-81598
0.004
6
7mer
116863-116888
0.004
1
8mer
177421-177440
0.004
1
8mer
67545-67568
0.003
1
8mer
11449-11472
0.003
1
8mer
27724-27744
0.003
0
8mer
14156-14179
0.003
1
7mer
4883-4901
0.003
1
8mer
135107-135130
0.003
1
8mer
236472-236495
0.003
1
9mer
261772-261792
0.003
Not Conserved
8mer
109480-109503
0.003
1
8mer
38248-38266
0.003
1
8mer
239060-239079
0.003
1
7mer
104450-104469
0.003
2
8mer
237872-237891
0.003
1
8mer
262098-262116
0.003
1
8mer
102888-102906
0.003
1
8mer
188881-188904
0.003
1
8mer
225068-225091
0.003
1
8mer
249438-249457
0.003
0
8mer
253387-253410
0.003
1
8mer
223518-223537
0.003
1
8mer
122233-122251
0.003
1
6mer
131792-131818
0.003
7
6mer
145375-145394
0.003
4
8mer
251548-251571
0.003
0
6mer
21989-22014
0.003
8
6mer
261151-261167
0.003
1
8mer
114894-114917
0.003
1
8mer
192477-192496
0.003
0
8mer
60218-60241
0.003
1
8mer
187101-187124
0.003
0
6mer
267034-267054
0.003
0
6mer
145004-145028
0.003
7
6mer
182709-182734
0.003
7
8mer
167715-167738
0.003
1
7mer
172897-172914
0.003
4
8mer
14855-14874
0.003
0
8mer
231647-231672
0.003
0
6mer
91979-92002
0.003
1
8mer
84837-84854
0.003
3
8mer
263098-263121
0.003
0
7mer
175535-175558
0.003
1
8mer
73054-73073
0.003
0
8mer
213280-213299
0.003
0
7mer
51811-51833
0.003
1
7mer
52419-52434
0.003
0
8mer
174440-174463
0.003
0
6mer
917-933
0.003
1
7mer
101870-101879
0.003
1
8mer
8822-8841
0.003
0
8mer
206111-206130
0.002
0
6mer
177002-177021
0.002
Not Conserved
6mer
150454-150475
0.002
5
8mer
209139-209158
0.002
1
8mer
247889-247908
0.002
0
6mer
178746-178768
0.002
1
8mer
37464-37483
0.002
Not Conserved
8mer
64967-64990
0.002
1
6mer
131045-131064
0.002
1
8mer
45037-45060
0.002
0
7mer
173807-173825
0.002
1
8mer
193330-193348
0.002
Not Conserved
6mer
175132-175155
0.002
2
6mer
43071-43091
0.002
1
6mer
219872-219891
0.002
5
7mer
102204-102221
0.002
1
8mer+mismatch
130361-130384
0.002
2
7mer
109797-109818
0.002
Not Conserved
6mer
11238-11252
0.002
1
6mer
152728-152751
0.002
1
6mer
248529-248547
0.002
0
6mer
220336-220362
0.002
0
6mer
131353-131375
0.002
3
6mer
16898-16921
0.002
1
8mer
252057-252080
0.002
1
8mer
181146-181169
0.002
Not Conserved
6mer
42160-42176
0.002
3
6mer
80779-80798
0.002
1
8mer
202786-202805
0.002
Not Conserved
6mer
50810-50822
0.002
0
6mer
19832-19858
0.002
1
6mer
33766-33777
0.002
2
6mer
203679-203699
0.002
0
6mer
13490-13513
0.002
1
6mer
161222-161242
0.002
1
6mer
71209-71234
0.002
1
7mer
121444-121463
0.002
1
6mer
229695-229716
0.002
0
8mer
231041-231064
0.002
0
6mer
250848-250867
0.002
0
6mer
44849-44864
0.002
0
6mer
84812-84832
0.002
3
6mer
170434-170450
0.002
0
6mer
63394-63404
0.002
1
8mer
166755-166775
0.002
1
6mer
15965-15992
0.002
0
6mer
92171-92189
0.002
3
6mer
260794-260814
0.002
1
6mer
68496-68516
0.002
0
6mer
78302-78328
0.002
1
6mer
184846-184867
0.002
1
6mer
266377-266391
0.002
0
6mer
198075-198093
0.002
0
6mer
171673-171700
0.002
1
6mer
56775-56788
0.002
2
7mer
183662-183687
0.002
0
6mer
108289-108310
0.002
1
6mer
55318-55345
0.002
0
6mer
166699-166718
0.002
2
6mer
202306-202318
0.002
Not Conserved
6mer
18591-18610
0.002
1
6mer
147589-147616
0.002
1
6mer
92503-92524
0.002
3
6mer
127892-127912
0.002
0
6mer
168979-169004
0.002
1
6mer
17633-17656
0.002
0
6mer
136113-136130
0.002
1
6mer
44100-44116
0.002
0
6mer
244007-244025
0.002
1
6mer
187396-187412
0.002
3
6mer
113936-113954
0.002
1
6mer
23495-23516
0.002
1
6mer
69734-69756
0.002
1
6mer
64808-64835
0.002
Not Conserved
6mer
215014-215026
0.001
0
7mer
6088-6107
0.001
0
6mer
194481-194493
0.001
1
6mer
186768-186781
0.001
1
8mer
250901-250920
0.001
0
6mer
87797-87817
0.001
1
6mer
30917-30934
0.001
1
6mer
80082-80096
0.001
Not Conserved
6mer
61676-61699
0.001
1
6mer
199899-199915
0.001
1
6mer
153974-153999
0.001
1
6mer
159183-159200
0.001
2
6mer
92403-92420
0.001
0
6mer
23020-23046
0.001
Not Conserved
6mer
24283-24300
0.001
0
7mer
95815-95838
0.001
0
6mer
154794-154814
0.001
2
6mer
255694-255712
0.001
1
6mer
113428-113447
0.001
0
6mer
126390-126416
0.001
1
6mer
8361-8375
0.001
1
6mer
68855-68874
0.001
1
6mer
182848-182871
0.001
3
6mer
236279-236299
0.001
0
6mer
145524-145538
0.001
0
8mer
234713-234731
0.001
0
6mer
245771-245785
0.001
0
6mer
71249-71275
0.001
0
6mer
228162-228173
0.001
1
6mer
2181-2207
0.001
1
6mer
251914-251936
0.001
0
6mer
98431-98446
0.001
0
6mer
240004-240027
0.001
1
6mer
115879-115905
0.001
1
6mer
5567-5585
0.001
3
6mer
255302-255321
0.001
1
6mer
45889-45903
0.001
1
6mer
16068-16084
0.001
0
6mer
153132-153151
0.001
1
6mer
85207-85226
0.001
1
6mer
10860-10883
0.001
1
6mer
121086-121104
0.001
1
6mer
242479-242490
0.001
0
6mer
35333-35353
0.001
1
6mer
159307-159317
0.001
1
6mer
240912-240935
0.001
1
6mer
217106-217122
0.001
0
7mer
100419-100442
0.001
0
6mer
73377-73396
0.001
0
6mer
177823-177842
0.001
1
6mer
134404-134429
0.001
1
6mer
43185-43202
0.001
1
6mer
153365-153388
0.001
0
6mer
217220-217242
0.001
0
6mer
202322-202340
0.001
Not Conserved
RP13-753N3.1
hsa-miR-106a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000584157
Biotype: antisense
Gene id: ENSG00000263531
Gene Name: RP13-753N3.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
6-24
0.072
0
8mer
516-542
0.059
0
8mer
142-161
0.055
0
TSIX
hsa-miR-106a-5p
1.000
mTTBlnEmP

Gene Details
Chromosome: X
Transcript: ENST00000604411
Biotype: lincRNA
Gene id: ENSG00000270641
Gene Name: TSIX
UCSC graphic:
Expression:
  Cell Line Tissue Category
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
32816-32842
0.026
5
8mer
36146-36167
0.021
3
9mer
33130-33154
0.013
2
7mer
36429-36449
0.008
1
7mer
33551-33565
0.008
4
8mer
33-56
0.008
0
7mer
23868-23885
0.006
2
8mer
34032-34043
0.005
2
8mer
30777-30802
0.005
1
7mer
30746-30766
0.004
1
6mer
35985-36011
0.004
2
7mer
31390-31417
0.004
Not Conserved
8mer
5222-5245
0.003
1
8mer
3393-3412
0.003
1
8mer
27462-27481
0.003
1
6mer
4833-4852
0.003
3
6mer
35703-35727
0.003
3
8mer
7150-7173
0.003
0
6mer
20660-20679
0.003
3
7mer
10082-10106
0.003
Not Conserved
7mer
6015-6030
0.002
1
6mer
2347-2372
0.002
0
6mer
24674-24698
0.002
1
6mer
29273-29294
0.002
1
7mer
27886-27907
0.002
1
6mer
28099-28119
0.002
0
6mer
21380-21406
0.002
0
6mer
15020-15036
0.002
Not Conserved
6mer
31590-31614
0.002
1
7mer
22847-22870
0.002
1
6mer
20034-20041
0.002
1
6mer
19487-19508
0.001
1
6mer
20937-20955
0.001
0
6mer
24335-24358
0.001
1
6mer
20456-20481
0.001
0
6mer
32863-32886
0.001
0
RP11-13N13.5
hsa-miR-106a-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: 18
Transcript: ENST00000584148
Biotype: sense_intronic
Gene id: ENSG00000264188
Gene Name: RP11-13N13.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
309-332
0.075
0
8mer
147-170
0.057
0
KCNQ1OT1
hsa-miR-106a-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: 11
Transcript: ENST00000597346
Biotype: antisense
Gene id: ENSG00000269821
Gene Name: KCNQ1OT1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
HepG2 Liver Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
18886-18904
0.014
1
8mer
38450-38469
0.011
0
8mer
423-446
0.008
1
7mer
34859-34879
0.007
0
7mer
87688-87705
0.005
1
8mer
12912-12931
0.005
1
8mer
71826-71845
0.004
0
8mer
71146-71166
0.004
0
9mer
18461-18486
0.004
1
7mer
82195-82217
0.003
0
6mer
66347-66351
0.003
5
8mer
12150-12173
0.003
0
6mer
1283-1299
0.003
1
6mer
89155-89170
0.003
3
6mer
3552-3568
0.002
1
7mer
14119-14145
0.002
0
6mer
55122-55142
0.002
4
6mer
49636-49653
0.002
1
6mer
67134-67153
0.002
2
6mer
88434-88460
0.002
1
7mer
55835-55859
0.002
1
6mer
47048-47071
0.002
3
6mer
13356-13364
0.002
1
6mer
88675-88700
0.002
2
6mer
70753-70773
0.002
0
6mer
63640-63660
0.002
1
6mer
2478-2497
0.002
1
6mer
6476-6496
0.002
1
7mer
52227-52254
0.002
1
6mer
5405-5428
0.002
1
6mer
48648-48668
0.002
2
6mer
1583-1601
0.002
1
6mer
88197-88211
0.002
1
6mer
66986-67005
0.002
1
6mer
72856-72874
0.002
1
6mer
20802-20826
0.002
1
6mer
18523-18545
0.002
1
6mer
38713-38728
0.002
0
6mer
46642-46660
0.001
0
6mer
76545-76568
0.001
0
6mer
78738-78749
0.001
0
6mer
33396-33411
0.001
0
6mer
77779-77799
0.001
1
6mer
52215-52238
0.001
1
XLOC_003276
hsa-miR-106a-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: chr3
Transcript: TCONS_00006679
Biotype: transcript isomorph
Gene id: XLOC_003276
Gene Name: XLOC_003276
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
44-64
0.099
7
6mer
12-29
0.017
7
6mer
167-184
0.005
1
LINC00293
hsa-miR-106a-5p
0.999
mTTBlnEmP

Gene Details
Chromosome: 8
Transcript: ENST00000518962
Biotype: lincRNA
Gene id: ENSG00000253314
Gene Name: LINC00293
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
666-692
0.079
1
8mer
390-417
0.040
0
RP11-374M1.2
hsa-miR-106a-5p
0.998
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000612999
Biotype: retained_intron
Gene id: ENSG00000231527
Gene Name: RP11-374M1.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
159-174
0.067
1
8mer
1279-1298
0.047
0
AC002519.8
hsa-miR-106a-5p
0.998
mTTBlnEmP

Gene Details
Chromosome: 16
Transcript: ENST00000570073
Biotype: sense_intronic
Gene id: ENSG00000259810
Gene Name: AC002519.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2057-2076
0.058
1
8mer
1133-1156
0.032
1
6mer
723-740
0.010
1
6mer
1730-1749
0.009
1
AC005592.3
hsa-miR-106a-5p
0.998
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000566527
Biotype: lincRNA
Gene id: ENSG00000261757
Gene Name: AC005592.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
535-555
0.052
1
7mer
745-769
0.015
2
7mer
108-127
0.015
Not Conserved
7mer
456-477
0.011
0
6mer
5-30
0.008
1
7mer
311-336
0.008
1
CTD-2015H6.3
hsa-miR-106a-5p
0.997
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000504300
Biotype: antisense
Gene id: ENSG00000249042
Gene Name: CTD-2015H6.3
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
51-73
0.095
2
8mer
419-438
0.013
1
AC006548.28
hsa-miR-106a-5p
0.997
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623130
Biotype: sense_overlapping
Gene id: ENSG00000280156
Gene Name: AC006548.28
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
2339-2357
0.007
0
8mer
59328-59342
0.006
1
8mer
63299-63320
0.005
1
8mer
71556-71577
0.004
Not Conserved
7mer
16542-16560
0.004
1
7mer
41049-41069
0.004
1
6mer
592-615
0.004
1
8mer
66883-66906
0.003
0
8mer
81629-81648
0.003
1
9mer
2176-2199
0.003
1
8mer
51926-51948
0.003
Not Conserved
7mer
59468-59493
0.003
1
6mer
1488-1515
0.002
1
6mer
31901-31920
0.002
1
6mer
28257-28283
0.002
0
6mer
21119-21145
0.002
0
6mer
1265-1281
0.002
1
7mer
36503-36520
0.002
1
6mer
36097-36116
0.002
4
6mer
30408-30427
0.002
1
6mer
8762-8781
0.002
0
6mer
3234-3254
0.002
1
6mer
35149-35173
0.002
1
6mer
67452-67477
0.002
Not Conserved
7mer
23288-23304
0.002
0
6mer
55725-55744
0.002
0
7mer
41578-41595
0.002
0
7mer
14176-14193
0.002
0
6mer
44742-44760
0.002
1
6mer
79525-79544
0.002
Not Conserved
6mer
72927-72953
0.002
0
6mer
31151-31177
0.002
1
6mer
67658-67684
0.002
0
6mer
73955-73980
0.002
1
6mer
56257-56283
0.001
0
6mer
24820-24824
0.001
0
6mer
2245-2250
0.001
1
6mer
21467-21493
0.001
1
6mer
20744-20764
0.001
1
6mer
38121-38140
0.001
1
6mer
31143-31157
0.001
1
6mer
67922-67940
0.001
Not Conserved
6mer
12105-12125
0.001
1
6mer
35981-36007
0.001
1
6mer
36842-36868
0.001
1
6mer
23274-23297
0.001
1
6mer
75138-75162
0.001
0
RP11-263K4.3
hsa-miR-106a-5p
0.997
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000548575
Biotype: lincRNA
Gene id: ENSG00000257431
Gene Name: RP11-263K4.3
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
531-550
0.062
1
8mer
710-729
0.018
1
7mer
2871-2898
0.009
3
6mer
2469-2488
0.007
4
6mer
256-270
0.006
1
6mer
2760-2786
0.003
0
RP11-374M1.2
hsa-miR-106a-5p
0.997
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000399894
Biotype: lincRNA
Gene id: ENSG00000231527
Gene Name: RP11-374M1.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
133-148
0.060
1
8mer
421-440
0.044
0
COX10-AS1
hsa-miR-106a-5p
0.996
mTTBlnEmP

Gene Details
Chromosome: 17
Transcript: ENST00000623598
Biotype: TEC
Gene id: ENSG00000236088
Gene Name: COX10-AS1
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1823-1849
0.097
0
6mer
521-536
0.005
Not Conserved
CTB-89H12.4
hsa-miR-106a-5p
0.996
mTTBlnEmP

Gene Details
Chromosome: 5
Transcript: ENST00000499521
Biotype: retained_intron
Gene id: ENSG00000230551
Gene Name: CTB-89H12.4
UCSC graphic:
Expression:
  Cell Line Tissue Category
K562 Blood Cancer/Malignant
GM12878 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
MCF7 Mammary Gland Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBACD3 - Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
559-585
0.046
10
7mer
534-557
0.017
10
6mer
709-723
0.008
9
8mer
6993-7016
0.006
1
6mer
8291-8309
0.005
4
6mer
8595-8618
0.005
0
6mer
5416-5441
0.004
6
6mer
1524-1542
0.003
3
6mer
1285-1306
0.002
0
6mer
4184-4209
0.002
1
6mer
2678-2705
0.002
1
6mer
2572-2589
0.001
2
6mer
3780-3803
0.001
1
TTTY10
hsa-miR-106a-5p
0.996
mTTBlnEmP

Gene Details
Chromosome: Y
Transcript: ENST00000455084
Biotype: lincRNA
Gene id: ENSG00000229236
Gene Name: TTTY10
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
7mer
250-275
0.064
0
7mer
203-216
0.024
0
6mer
592-613
0.012
0
XLOC_012755
hsa-miR-106a-5p
0.995
mTTBlnEmP

Gene Details
Chromosome: chr18
Transcript: TCONS_00026408
Biotype: transcript isomorph
Gene id: XLOC_012755
Gene Name: XLOC_012755
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Kidney Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
36-55
0.074
0
6mer
89-99
0.025
0
CTA-292E10.9
hsa-miR-106a-5p
0.995
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623127
Biotype: antisense
Gene id: ENSG00000280111
Gene Name: CTA-292E10.9
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
343-360
0.030
1
7mer
24406-24431
0.007
0
7mer
18583-18600
0.005
1
8mer
5241-5261
0.005
0
8mer
20048-20071
0.005
0
7mer
17546-17572
0.004
0
7mer
22093-22104
0.004
0
7mer
15303-15324
0.003
0
6mer
14553-14573
0.003
3
6mer
13920-13946
0.003
1
6mer
10077-10090
0.003
3
8mer
20709-20732
0.003
0
8mer
18912-18929
0.002
0
6mer
4919-4940
0.002
3
6mer
23460-23486
0.002
1
6mer
12928-12945
0.002
1
6mer
11425-11441
0.002
1
6mer
8362-8385
0.002
1
6mer
14234-14255
0.002
Not Conserved
6mer
11904-11926
0.002
0
6mer
4378-4397
0.002
1
6mer
8934-8958
0.001
0
6mer
18659-18676
0.001
2
6mer
18631-18656
0.001
0
6mer
13155-13178
0.001
1
6mer
8987-9011
0.001
3
RP11-553L6.5
hsa-miR-106a-5p
0.995
mTTBlnEmP

Gene Details
Chromosome: 3
Transcript: ENST00000570269
Biotype: lincRNA
Gene id: ENSG00000259976
Gene Name: RP11-553L6.5
UCSC graphic:
Expression:
  Cell Line Tissue Category
HUVEC Blood Vessel Normal/Primary
hMSC-BM Bone Marrow Stem/Progenitor
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
A549 Lung Cancer/Malignant
LCLBAC - Normal/Primary
LCLBACD1 - Normal/Primary


miRNA Details
Name: hsa-miR-106a-5p
Sequence: aaaagugcuuacagugcagguag
MirBase ID: MIMAT0000103
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
93-105
0.072
15
6mer
76-102
0.013
12
7mer
1400-1422
0.012
9
Funded by:
We have placed cookies on your device to help make this website and the services we offer better. By using this site, you agree to the use of cookies. Learn more
I accept